@COMMENT This file was generated by bib2html.pl version 0.94 @COMMENT written by Patrick Riley @COMMENT This file came from Sanjit Seshia's publication pages at http://www.eecs.berkeley.edu/~sseshia @InProceedings{srivastava-iwbda12, author = {Saurabh Srivastava and Jonathan Kotker and Stephi Hamilton and Paul Ruan and Jeff Tsui and J. Christopher Anderson and Rastislav Bodik and Sanjit A. Seshia}, title = {Pathway Synthesis Using the Act Ontology}, booktitle = {Proceedings of the 4th International Workshop on Bio-Design Automation (IWBDA)}, month = {June}, year = {2012}, abstract = {We describe here the Act Ontology, a formalism for uniformly describing biochemical function, and its use in building an enzymatic pathway synthesizer. A formal description of biochemical function allows us to reason about it, and, for the particular case of enzymes, this function allows us to build a synthesizer tool that given a target chemical can automatically infer the most likely pathway that leads to it. The pathway can include known as well as hypothetical enzymes with predicted function.}, }